PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D10G0995
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 405aa    MW: 45511.9 Da    PI: 6.6861
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D10G0995genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.7e-11120155438
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH.HHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee.kvkeL 38 
                  +k +rr+++NReAAr+sR+RKka++++Le+ + k L
  Gh_D10G0995 120 DKIQRRLAQNREAARKSRLRKKAYVQQLENsRLKLL 155
                  799*************************97334433 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.3E-7117199IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.76119161IPR004827Basic-leucine zipper domain
PfamPF001701.3E-7120156IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.06E-7121161No hitNo description
Gene3DG3DSA:1.20.5.1707.4E-8122162No hitNo description
PROSITE patternPS000360124139IPR004827Basic-leucine zipper domain
PfamPF141441.1E-29208282IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MANGLILLIF SKLLISGTYL DITYTHITPF SSSTYAKAAS IFDSRSMESQ FVPSRRMDIY  60
DPIQQIGMWG ESFNANSNLH ASVSVIAEMD NKISNESETA SHEMLAPSNK YEQEATKRID  120
KIQRRLAQNR EAARKSRLRK KAYVQQLENS RLKLLQLEQE LVQMKQQGVY MGGGLVGGNL  180
GFSAPVKSGI AAFETEYARW MDEQSKQICG LRAALNAEIS DTDLQMLVET GMKHYSELFR  240
MKSTAAKSDV FYVMSGMWKT SAEQFFSWIG GFRPSELLKV LLPQLDSLTE QQFFEVCNLK  300
QSCQQAEDAL SQGMEKLREI VSVTVADGQL GEGSYSSQVT TAMEKVEALV SFVNQADHIR  360
QETLQQMSRI LTIRQTARGL LALGEYFERL RALSSLWATC AREPA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012457230.10.0PREDICTED: transcription factor TGA4-like
RefseqXP_012457231.10.0PREDICTED: transcription factor TGA4-like
RefseqXP_012457232.10.0PREDICTED: transcription factor TGA4-like
RefseqXP_012457234.10.0PREDICTED: transcription factor TGA4-like
SwissprotQ391621e-171TGA4_ARATH; Transcription factor TGA4
TrEMBLA0A0D2RKM10.0A0A0D2RKM1_G
STRINGVIT_07s0031g01320.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2480734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-156TGACG motif-binding factor 4